STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64005.1Hypothetical protein. (438 aa)    
Predicted Functional Partners:
abrB
Transcriptional regulator AbrB.
  
     0.773
AHF63131.1
Hypothetical protein.
  
     0.773
AHF64397.1
Hypothetical protein.
  
     0.773
AHF63186.1
Hypothetical protein.
  
     0.770
AHF64227.1
Hypothetical protein.
  
     0.770
AHF62797.1
Hypothetical protein.
  
     0.769
AHF62821.1
Hypothetical protein.
  
     0.769
AHF62692.1
Hypothetical protein.
  
     0.768
AHF63342.1
Hypothetical protein.
  
     0.768
AHF63422.1
HTH of cAMP family transcriptional regulator.
  
     0.766
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.