STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64012.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
AHF64776.1
Hypothetical protein.
  
     0.768
AHF62744.1
Hypothetical protein.
  
     0.761
AHF64042.1
Hypothetical protein.
  
     0.761
AHF62930.1
Hypothetical protein.
  
     0.760
AHF65048.1
Hypothetical protein.
  
     0.746
AHF64805.1
Hypothetical protein.
  
     0.743
rpcF
Phycobilin lyase beta subunit.
  
     0.742
rpcE
Phycobilin lyase alpha subunit.
  
     0.740
AHF64196.1
Hypothetical protein; Belongs to the BI1 family.
  
     0.733
AHF63231.1
Hypothetical protein.
  
     0.730
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.