STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipA-2Lipase family protein. (195 aa)    
Predicted Functional Partners:
dgkA
Putative diacylglycerol kinase.
     
 0.902
AHF62490.1
Putative glycosyltransferase.
   
 
 0.900
fadD
Putative long-chain-fatty-acid--CoA ligase.
     
 0.822
folB
Dihydroneopterin aldolase.
       0.785
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
       0.784
AHF64022.1
ROK family sugar kinase.
       0.775
AHF64023.1
Hypothetical protein.
       0.729
AHF64024.1
Hypothetical protein.
 
     0.590
AHF64025.1
Hypothetical protein.
       0.525
AHF63760.1
Hypothetical protein.
  
   
 0.483
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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