STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
petJ-2Cytochrome c6 (soluble cytochrome f) (cytochrome c553). (118 aa)    
Predicted Functional Partners:
petJ
Putative cytochrome c6 (soluble cytochrome f) (cytochrome c553).
  
  
  0.957
AHF64051.1
Hypothetical protein.
       0.714
AHF64522.1
Hypothetical protein.
  
     0.676
AHF62653.1
Hypothetical protein.
  
     0.664
AHF63335.1
Hypothetical protein.
  
     0.654
AHF62954.1
Hypothetical protein.
  
     0.609
AHF64174.1
Hypothetical protein.
  
     0.600
psbO
Photosystem II manganese-stabilizing polypeptide.
  
   
 0.577
AHF63696.1
Hypothetical protein.
  
     0.572
AHF64776.1
Hypothetical protein.
  
     0.566
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.