Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64053.1YciI-like protein. (89 aa)    
Predicted Functional Partners:
AHF64054.1
Transcriptional regulator AbrB.
 
     0.748
rpl32
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.658
AHF64283.1
Hypothetical protein.
  
     0.648
AHF64565.1
Hypothetical protein.
  
     0.648
ndhO
Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.633
psbN
Photosystem II reaction centre N protein (psbN); May play a role in photosystem I and II biogenesis. Belongs to the PsbN family.
  
     0.629
cytM
Cytochrome cM.
  
     0.628
AHF62710.1
Hypothetical protein.
  
     0.582
AHF62593.1
Hypothetical protein.
  
     0.580
AHF63230.1
Putative high light inducible protein.
  
   
 0.572
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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