STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pyrCDihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. (348 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
 
 
 0.980
pyrB
Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
 
 0.967
pyrB-2
Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 
 0.967
AHF63150.1
Putative dihydroorotase.
    
 0.912
AHF64058.1
Hypothetical protein.
       0.773
AHF64060.1
Putative sulfate transporter.
       0.773
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
   
  
 0.651
carA
Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
   
  
 0.638
AHF64061.1
K+-dependent Na+/Ca+ exchanger related-protein.
       0.577
AHF64056.1
Hypothetical protein.
       0.575
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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