Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64066.1Hypothetical protein. (410 aa)    
Predicted Functional Partners:
gshR
Putative glutathione reductase (NADPH).
  
 0.956
AHF62538.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.905
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
    
 0.904
AHF63445.1
Gamma-glutamyltransferase.
     
 0.903
gst
Putative glutathione S-transferase.
     
  0.900
AHF63365.1
Glutathione S-transferase domain protein.
     
  0.900
AHF64755.1
Putative glutathione S-transferase.
     
  0.900
AHF64065.1
Hypothetical protein.
       0.773
AHF62895.1
Hypothetical protein.
  
     0.722
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
  0.716
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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