Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64174.1Hypothetical protein. (832 aa)    
Predicted Functional Partners:
AHF63832.1
Small GTP-binding protein domain protein.
  
 
 0.874
AHF64725.1
ATP-dependent helicase HrpB.
    
  0.788
AHF63111.1
Hypothetical protein.
  
 
   0.716
AHF64522.1
Hypothetical protein.
  
     0.700
AHF63335.1
Hypothetical protein.
  
     0.668
AHF62796.1
Hypothetical protein.
  
     0.650
AHF62707.1
Hypothetical protein.
  
     0.645
AHF64311.1
Hypothetical protein.
  
     0.639
cypX
Cytochrome P450 family protein.
  
 
  0.613
AHF62591.1
Hypothetical protein.
  
     0.607
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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