Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64191.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
AHF64190.1
Putative circadian phase modifier CpmA.
       0.773
AHF63551.1
Hypothetical protein.
  
     0.749
AHF63422.1
HTH of cAMP family transcriptional regulator.
  
     0.746
AHF63889.1
Hypothetical protein.
  
     0.746
AHF63760.1
Hypothetical protein.
  
     0.721
AHF63695.1
Hypothetical protein.
  
     0.718
AHF63113.1
Hypothetical protein.
  
     0.708
AHF63262.1
Putative AEC transporter family.
  
     0.697
psbM
Putative photosystem II reaction center M protein; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface.
  
     0.686
AHF64678.1
Hypothetical protein.
  
     0.686
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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