Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64195.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
hli6
Putative high light inducible protein.
  
     0.769
hli2
Putative high light inducible protein.
  
     0.725
AHF63382.1
Hypothetical protein.
  
     0.719
AHF62565.1
Hypothetical protein.
  
     0.693
hupE
Putative hydrogenase accessory protein.
  
     0.633
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.631
AHF64398.1
Putative multidrug efflux transporter, MFS family.
  
     0.609
AHF62947.1
Putative ring-cleaving dioxygenase.
  
     0.607
AHF64877.1
Hypothetical protein.
  
     0.593
AHF63218.1
Hypothetical protein.
  
     0.573
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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