Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64200.1Hypothetical protein. (661 aa)    
Predicted Functional Partners:
AHF63770.1
Hypothetical protein.
  
 
 
 0.797
AHF62616.1
Putative ABC transporter.
  
   
 0.788
AHF62729.1
Hypothetical protein.
  
     0.765
AHF64397.1
Hypothetical protein.
  
     0.765
AHF63422.1
HTH of cAMP family transcriptional regulator.
  
 
   0.763
abrB
Transcriptional regulator AbrB.
  
     0.761
AHF64005.1
Hypothetical protein.
  
     0.752
AHF62816.1
Hypothetical protein.
  
 
   0.751
AHF63186.1
Hypothetical protein.
  
     0.745
AHF62821.1
Hypothetical protein.
  
     0.740
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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