STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64227.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
AHF64228.1
Cell division protein FtsQ.
 
     0.845
AHF63422.1
HTH of cAMP family transcriptional regulator.
  
     0.772
AHF64005.1
Hypothetical protein.
  
     0.770
AHF63131.1
Hypothetical protein.
  
     0.769
AHF64397.1
Hypothetical protein.
  
     0.768
AHF63186.1
Hypothetical protein.
  
     0.761
ddlB
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.746
abrB
Transcriptional regulator AbrB.
  
     0.745
AHF62821.1
Hypothetical protein.
  
     0.740
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.740
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.