STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64285.1Hypothetical protein. (79 aa)    
Predicted Functional Partners:
AHF64409.1
Ferredoxin.
  
 
 0.933
ldpA
Putative LdpA protein.
  
 
 0.882
AHF64283.1
Hypothetical protein.
 
     0.855
cobB
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
       0.810
AHF63829.1
Hypothetical protein.
  
     0.774
AHF64286.1
Putative chloride channel.
       0.773
AHF63336.1
Hypothetical protein.
  
     0.771
AHF64739.1
Hypothetical protein.
  
     0.770
AHF63187.1
Hypothetical protein.
  
     0.769
atp1
Putative ATP synthase protein 1.
  
     0.769
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.