Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
csoS2Putative carboxysome structural peptide CsoS2. (693 aa)    
Predicted Functional Partners:
AHF64293.1
Putative carboxysome peptide B.
 
 
   0.977
AHF64294.1
Putative carboxysome peptide A.
 
 
   0.977
csoS3
Putative carboxysome shell polypeptide CsoS3.
 
   
 0.972
rbcS
Ribulose-bisphosphate carboxylase.
 
   
 0.869
AHF64288.1
Hypothetical protein.
 
     0.864
ccmK2
Putative carbon dioxide concentrating mechanism protein CcmK.
 
 
 
 0.842
ccmK
Carboxysome shell peptide, CsoS1.
 
 
 
 0.825
AHF64302.1
Hypothetical protein.
 
 
 
 0.818
rbcL
Ribulose bisphosphate carboxylase, large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.
 
   
 0.759
AHF62897.1
Carbohydrate kinase, FGGY family.
  
     0.735
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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