Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rbcSRibulose-bisphosphate carboxylase. (113 aa)    
Predicted Functional Partners:
rbcL
Ribulose bisphosphate carboxylase, large chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.999
prk
Phosphoribulokinase.
 
 
 0.972
csoS3
Putative carboxysome shell polypeptide CsoS3.
 
 
 
 0.967
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.930
AHF62899.1
HAD-superfamily hydrolase subfamily IA, variant 3.
    
 0.903
AHF63707.1
Hypothetical protein.
     
  0.900
csoS2
Putative carboxysome structural peptide CsoS2.
 
   
 0.869
AHF64293.1
Putative carboxysome peptide B.
 
 
 
 0.830
AHF64294.1
Putative carboxysome peptide A.
 
 
 
 0.827
ccmK
Carboxysome shell peptide, CsoS1.
   
 
 0.803
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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