STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64320.1Hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes. (239 aa)    
Predicted Functional Partners:
AHF64319.1
Hypothetical protein.
 
 
 
 0.997
AHF63336.1
Hypothetical protein.
  
     0.754
nrdJ
Ribonucleotide reductase (class II).
  
     0.754
AHF62807.1
Hypothetical protein.
  
     0.746
pex
Putative Pex protein.
  
     0.729
AHF62712.1
Hypothetical protein.
  
     0.726
AHF63135.1
Hypothetical protein.
  
     0.680
atp1
Putative ATP synthase protein 1.
  
     0.680
AHF63187.1
Hypothetical protein.
  
    0.678
AHF64228.1
Cell division protein FtsQ.
  
     0.664
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.