Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64320.1Hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes. (239 aa)    
Predicted Functional Partners:
AHF64319.1
Hypothetical protein.
 
 
 
 0.993
AHF63336.1
Hypothetical protein.
  
     0.754
nrdJ
Ribonucleotide reductase (class II).
  
     0.754
AHF62807.1
Hypothetical protein.
  
     0.746
pex
Putative Pex protein.
  
     0.729
AHF62712.1
Hypothetical protein.
  
     0.726
AHF63135.1
Hypothetical protein.
  
     0.680
AHF63187.1
Hypothetical protein.
  
    0.680
atp1
Putative ATP synthase protein 1.
  
     0.680
AHF64228.1
Cell division protein FtsQ.
  
     0.664
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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