STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64321.1Creatininase. (280 aa)    
Predicted Functional Partners:
codA
Putative cytosine deaminase.
 
  
 0.951
AHF62699.1
Hypothetical protein.
  
  
 
0.928
AHF64220.1
Hypothetical protein.
     0.655
AHF64320.1
Hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
       0.636
rps1b
RNA binding S1.
       0.635
AHF64323.1
Hypothetical protein.
       0.635
AHF64324.1
Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.622
AHF64319.1
Hypothetical protein.
       0.489
accA
acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
       0.473
AHF62490.1
Putative glycosyltransferase.
  
  
 0.406
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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