STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64323.1Hypothetical protein. (294 aa)    
Predicted Functional Partners:
rps1b
RNA binding S1.
 
    0.841
AHF64324.1
Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.792
psbO
Photosystem II manganese-stabilizing polypeptide.
  
    0.773
thf1
Thf1-like protein; May be involved in photosynthetic membrane biogenesis.
  
    0.773
AHF63886.1
Hypothetical protein.
  
     0.773
AHF63908.1
Hypothetical protein.
  
     0.773
AHF64667.1
Hypothetical protein.
  
    0.772
AHF63588.1
Hypothetical protein.
  
     0.771
psb28
Putative photosystem II reaction center Psb28 protein; Belongs to the Psb28 family.
  
     0.770
AHF62609.1
Photosystem II stability/assembly factor-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.769
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.