STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opcAPutative glucose 6-phosphate dehydrogenase effector OpcA. (428 aa)    
Predicted Functional Partners:
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
 0.847
cbiA
Cobyrinic acid a,c-diamide synthase.
       0.767
AHF63342.1
Hypothetical protein.
  
     0.746
AHF64359.1
Putative acylphosphatase.
       0.746
AHF64397.1
Hypothetical protein.
  
     0.746
AHF64005.1
Hypothetical protein.
  
     0.742
AHF63131.1
Hypothetical protein.
  
     0.737
AHF64877.1
Hypothetical protein.
  
     0.733
abrB
Transcriptional regulator AbrB.
  
     0.724
AHF64024.1
Hypothetical protein.
  
     0.718
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.