STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
opcAPutative glucose 6-phosphate dehydrogenase effector OpcA. (428 aa)    
Predicted Functional Partners:
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 0.982
cbiA
Cobyrinic acid a,c-diamide synthase.
       0.781
AHF63342.1
Hypothetical protein.
  
     0.746
AHF64397.1
Hypothetical protein.
  
     0.746
AHF64005.1
Hypothetical protein.
  
     0.742
AHF64359.1
Putative acylphosphatase.
       0.740
AHF63131.1
Hypothetical protein.
  
     0.737
AHF64877.1
Hypothetical protein.
  
     0.733
abrB
Transcriptional regulator AbrB.
  
     0.724
AHF64024.1
Hypothetical protein.
  
     0.718
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.