STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64374.1Putative permease protein of sugar ABC transporter. (274 aa)    
Predicted Functional Partners:
lacF
Lactose transport system permease protein.
 0.990
AHF62551.1
Twin-arginine translocation pathway signal.
 
 0.986
AHF62949.1
ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.958
AHF63622.1
ABC transporter for possibly for trehalose/maltose, membrane component.
 
 0.953
AHF63620.1
ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.931
AHF63623.1
ABC transporter, likely sugar solute binding protein.
 
 
 0.885
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
       0.779
AHF64376.1
Hypothetical protein; Belongs to the glycosyl hydrolase 57 family.
       0.542
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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