STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64395.1ABC transporter, substrate binding protein. (540 aa)    
Predicted Functional Partners:
dppB
Putative ABC transporter, oligopeptide.
 0.998
AHF64256.1
Putative ABC transporter, oligopeptide.
 
 0.993
AHF64872.1
ATPase.
 
 
 0.983
glsF
Glutamate synthase (NADPH).
      
 0.620
AHF64394.1
Hypothetical protein.
       0.570
thrA
Homoserine dehydrogenase.
     
 0.479
fabG
3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.422
rne
Ribonuclease, Rne/Rng family.
      
 0.420
hisM
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
   
 
 0.418
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
      
 0.407
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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