STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64400.1Hypothetical protein. (857 aa)    
Predicted Functional Partners:
AHF64399.1
Hypothetical protein.
       0.773
AHF62433.1
Hypothetical protein.
  
     0.699
AHF64764.1
Hypothetical protein.
 
   
 0.554
AHF64569.1
Hypothetical protein.
   
  0.550
AHF62562.1
Hypothetical protein.
  
     0.547
AHF63637.1
Hypothetical protein.
  
 
 0.512
AHF64456.1
Hypothetical protein.
  
 
 0.512
AHF64401.1
Hypothetical protein.
       0.469
AHF62512.1
Putative bacterial sugar transferase.
     
 0.421
AHF64239.1
Undecaprenyl-phosphate galactosephosphotransferase.
     
 0.421
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.