Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64400.1Hypothetical protein. (857 aa)    
Predicted Functional Partners:
AHF64399.1
Hypothetical protein.
       0.773
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 
  0.766
AHF62538.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
  0.755
AHF62433.1
Hypothetical protein.
  
  
  0.742
AHF63637.1
Hypothetical protein.
   
 0.728
AHF64456.1
Hypothetical protein.
   
 0.728
AHF62466.1
DEAD/DEAH box helicase-like protein.
  
 
  0.668
AHF64908.1
DEAD/DEAH box helicase-like protein.
  
 
  0.665
AHF64764.1
Hypothetical protein.
 
  
 0.637
AHF62562.1
Hypothetical protein.
  
  
  0.613
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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