STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64403.1Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (357 aa)    
Predicted Functional Partners:
AHF63607.1
Putative ABC transporter.
 
 
 0.924
AHF63038.1
ATPase.
 
 
 0.869
AHF64700.1
Hydrophobe/amphiphile efflux-1 HAE1; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.862
AHF62749.1
Putative RND family multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.858
AHF64736.1
Putative RND family outer membrane efflux protein.
 
 
 0.853
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.743
AHF63824.1
DevC protein.
 
 
 0.714
AHF64701.1
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.684
cysRS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.613
AHF63823.1
ATPase.
 
 
 0.595
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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