Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHF64407.1Putative sodium-dependent transporter, NSS family. (439 aa)    
Predicted Functional Partners:
udk
Putative phosphoribulokinase/uridine kinase family protein.
   
 
  0.755
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
       0.573
AHF64409.1
Ferredoxin.
       0.572
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
 
  0.566
AHF64750.1
Putative riboflavin-specific deaminase.
   
 
  0.566
AHF64630.1
Band 7 protein.
     
  0.565
AHF64631.1
Band 7 protein.
     
  0.565
AHF65002.1
Sodium:solute transporter family, possible urea transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
 
 0.550
AHF62631.1
Putative glycine betaine transporter, BCCT family protein; Belongs to the BCCT transporter (TC 2.A.15) family.
  
    0.484
alsT
Amino acid carrier protein.
 
   
 0.471
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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