STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64420.1Thioredoxin reductase. (460 aa)    
Predicted Functional Partners:
AHF62599.1
Selenide,water dikinase.
   
 0.965
hflX
Putative GTP-binding protein, transporter associated; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
  
 
 0.962
tpx
Thioredoxin peroxidase.
  
 
 0.946
metB
Cystathionine gamma-synthase.
  
 
 0.916
AHF64682.1
Cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.908
glsF
Glutamate synthase (NADPH).
   
 
 0.833
trxA
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.815
AHF62805.1
Rhodanese-like protein.
  
  
 0.799
trxA_1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.789
AHF63187.1
Hypothetical protein.
  
 
 0.788
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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