Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64440.1Hypothetical protein. (147 aa)    
Predicted Functional Partners:
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
     0.786
AHF64665.1
Hypothetical protein.
  
     0.743
AHF63135.1
Hypothetical protein.
  
     0.738
AHF63829.1
Hypothetical protein.
  
     0.733
AHF63336.1
Hypothetical protein.
  
     0.720
AHF64739.1
Hypothetical protein.
  
     0.720
AHF64285.1
Hypothetical protein.
  
     0.719
AHF63187.1
Hypothetical protein.
  
     0.717
abrB
Transcriptional regulator AbrB.
  
     0.705
AHF64515.1
Hypothetical protein.
  
     0.699
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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