STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cobI/cbiLPrecorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family. (236 aa)    
Predicted Functional Partners:
cobJ
precorrin-3B C17-methyltransferase.
 
 0.999
cobL
Putative precorrin-6y methylase.
 
  
 0.989
AHF63136.1
precorrin-6X reductase.
 
  
 0.985
cobH
Putative precorrin-8X methylmutase CobH.
 
  
 0.983
AHF63250.1
Hypothetical protein.
 
  
 0.971
cobB
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.961
cobM
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
0.942
cobA
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.929
cbiA
Cobyrinic acid a,c-diamide synthase.
 
  
 0.905
cbiD
Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.869
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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