Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64457.1Putative cobalt transport protein. (302 aa)    
Predicted Functional Partners:
AHF64792.1
ATPase.
 
 0.996
AHF63768.1
ATPase.
 
 0.995
AHF64872.1
ATPase.
  
 0.982
AHF63830.1
BioY protein.
 
 0.981
AHF64456.1
Hypothetical protein.
 
   
 0.862
drrA
ATPase.
    
 0.847
der
Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
  
 0.837
futC
ATPase; Belongs to the ABC transporter superfamily.
   
 
 0.831
AHF63757.1
Phosphonate-binding periplasmic protein.
     
 0.824
hisM
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
   
 
  0.819
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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