der protein (Synechococcus sp. WH 8109) - STRING interaction network

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der

Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (437 aa)

Predicted Functional Partners:

panC

0.958

rpl1

0.850

AHF64457.1

0.837

AHF64456.1

0.833

rpl15

0.829

rpl20

0.814

AHF64455.1

0.811

rplN

0.779

rpl18

0.778

rpl2

0.778

Your Current Organism:

Synechococcus sp. WH 8109

NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHF64455.1	AHF64456.1	Syncc8109_2117	Syncc8109_2118	Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.	Hypothetical protein.	0.833
AHF64455.1	AHF64457.1	Syncc8109_2117	Syncc8109_2119	Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.	Putative cobalt transport protein.	0.811
AHF64455.1	der	Syncc8109_2117	Syncc8109_2120	Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.811
AHF64456.1	AHF64455.1	Syncc8109_2118	Syncc8109_2117	Hypothetical protein.	Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.	0.833
AHF64456.1	AHF64457.1	Syncc8109_2118	Syncc8109_2119	Hypothetical protein.	Putative cobalt transport protein.	0.862
AHF64456.1	der	Syncc8109_2118	Syncc8109_2120	Hypothetical protein.	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.833
AHF64456.1	rpl15	Syncc8109_2118	Syncc8109_0363	Hypothetical protein.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.438
AHF64457.1	AHF64455.1	Syncc8109_2119	Syncc8109_2117	Putative cobalt transport protein.	Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.	0.811
AHF64457.1	AHF64456.1	Syncc8109_2119	Syncc8109_2118	Putative cobalt transport protein.	Hypothetical protein.	0.862
AHF64457.1	der	Syncc8109_2119	Syncc8109_2120	Putative cobalt transport protein.	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.837
der	AHF64455.1	Syncc8109_2120	Syncc8109_2117	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.	0.811
der	AHF64456.1	Syncc8109_2120	Syncc8109_2118	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Hypothetical protein.	0.833
der	AHF64457.1	Syncc8109_2120	Syncc8109_2119	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Putative cobalt transport protein.	0.837
der	panC	Syncc8109_2120	Syncc8109_0433	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.	0.958
der	rpl1	Syncc8109_2120	Syncc8109_2580	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.850
der	rpl15	Syncc8109_2120	Syncc8109_0363	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.829
der	rpl18	Syncc8109_2120	Syncc8109_0365	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.778
der	rpl2	Syncc8109_2120	Syncc8109_0377	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.778
der	rpl20	Syncc8109_2120	Syncc8109_0062	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.814
der	rplN	Syncc8109_2120	Syncc8109_0370	Small GTP-binding protein domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.779

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