STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64460.1Hypothetical protein. (155 aa)    
Predicted Functional Partners:
AHF62676.1
Hypothetical protein.
  
     0.757
rpoZ
Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.756
AHF64483.1
Hypothetical protein.
  
     0.750
AHF64807.1
Hypothetical protein.
  
     0.741
AHF63191.1
Hypothetical protein.
  
     0.732
rpl32
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.724
AHF63637.1
Hypothetical protein.
  
     0.710
AHF64791.1
Hypothetical protein; Belongs to the UPF0367 family.
  
     0.710
AHF64285.1
Hypothetical protein.
  
     0.697
AHF64739.1
Hypothetical protein.
  
     0.689
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.