Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHF63691.1 | atpA | Syncc8109_1327 | Syncc8109_2269 | Hypothetical protein. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.773 |
| AHF63691.1 | fumC | Syncc8109_1327 | Syncc8109_2129 | Hypothetical protein. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.815 |
| AHF63691.1 | glsF | Syncc8109_1327 | Syncc8109_0331 | Hypothetical protein. | Glutamate synthase (NADPH). | 0.642 |
| AHF63691.1 | gltA | Syncc8109_1327 | Syncc8109_2523 | Hypothetical protein. | 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family. | 0.845 |
| argH | fumC | Syncc8109_0014 | Syncc8109_2129 | Argininosuccinate lyase. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.819 |
| argH | glsF | Syncc8109_0014 | Syncc8109_0331 | Argininosuccinate lyase. | Glutamate synthase (NADPH). | 0.786 |
| argH | gltA | Syncc8109_0014 | Syncc8109_2523 | Argininosuccinate lyase. | 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family. | 0.829 |
| argH | mqo | Syncc8109_0014 | Syncc8109_1915 | Argininosuccinate lyase. | Malate:quinone-oxidoreductase. | 0.823 |
| aspC | fumC | Syncc8109_1393 | Syncc8109_2129 | Aminotransferases class-I. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.814 |
| aspC | glsF | Syncc8109_1393 | Syncc8109_0331 | Aminotransferases class-I. | Glutamate synthase (NADPH). | 0.685 |
| aspC | gltA | Syncc8109_1393 | Syncc8109_2523 | Aminotransferases class-I. | 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family. | 0.845 |
| aspC | mqo | Syncc8109_1393 | Syncc8109_1915 | Aminotransferases class-I. | Malate:quinone-oxidoreductase. | 0.820 |
| aspC | nadB | Syncc8109_1393 | Syncc8109_2430 | Aminotransferases class-I. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.814 |
| atpA | AHF63691.1 | Syncc8109_2269 | Syncc8109_1327 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Hypothetical protein. | 0.773 |
| atpA | fumC | Syncc8109_2269 | Syncc8109_2129 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.542 |
| atpA | gltA | Syncc8109_2269 | Syncc8109_2523 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family. | 0.726 |
| fumC | AHF63691.1 | Syncc8109_2129 | Syncc8109_1327 | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | Hypothetical protein. | 0.815 |
| fumC | argH | Syncc8109_2129 | Syncc8109_0014 | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | Argininosuccinate lyase. | 0.819 |
| fumC | aspC | Syncc8109_2129 | Syncc8109_1393 | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | Aminotransferases class-I. | 0.814 |
| fumC | atpA | Syncc8109_2129 | Syncc8109_2269 | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.542 |
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