STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64515.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
AHF63187.1
Hypothetical protein.
  
     0.774
AHF63219.1
Hypothetical protein.
  
     0.773
AHF63010.1
Hypothetical protein.
  
     0.772
AHF62797.1
Hypothetical protein.
  
     0.771
AHF63336.1
Hypothetical protein.
  
     0.771
secE
SecE subunit of protein translocation complex; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.771
AHF63110.1
Hypothetical protein.
  
     0.770
AHF63243.1
Hypothetical protein.
  
     0.770
AHF63135.1
Hypothetical protein.
  
     0.769
atp1
Putative ATP synthase protein 1.
  
     0.769
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.