STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64546.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
AHF64062.1
Plastoquinol terminal oxidase.
   
 0.660
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.636
AHF63943.1
Hypothetical protein.
  
    0.632
acpP
Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.614
AHF63997.1
Hypothetical protein.
   
   0.612
AHF64757.1
ATPases involved in chromosome partitioning-like protein.
  
    0.605
chlD
Magnesium chelatase ATPase subunit D.
  
 
 0.578
AHF63099.1
Putative phosphoribosyltransferase family protein.
  
     0.577
AHF64754.1
Hypothetical protein.
  
     0.493
ubiH
Putative 2-octaprenyl-6-methoxyphenol 4-monooxygenase; UbiH.
   
 0.479
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.