Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
gphPutative HAD superfamily phosphatase. (256 aa)    
Predicted Functional Partners:
AHF64581.1
Hypothetical protein; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
 
     0.711
AHF63191.1
Hypothetical protein.
  
     0.700
nrdJ
Ribonucleotide reductase (class II).
  
     0.671
pex
Putative Pex protein.
 
     0.653
hli8
Putative high light inducible protein.
  
     0.637
AHF63219.1
Hypothetical protein.
  
     0.603
AHF63024.1
Hypothetical protein.
  
     0.601
AHF63243.1
Hypothetical protein.
  
     0.584
hisC
Aminotransferases class-I.
 
  
 0.583
AHF64559.1
Hypothetical protein.
  
     0.559
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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