STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
atp1Putative ATP synthase protein 1. (112 aa)    
Predicted Functional Partners:
atpB
ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
  0.794
AHF63336.1
Hypothetical protein.
  
     0.774
AHF63187.1
Hypothetical protein.
  
     0.773
AHF63010.1
Hypothetical protein.
  
     0.770
AHF63110.1
Hypothetical protein.
  
     0.769
AHF64285.1
Hypothetical protein.
  
     0.769
AHF64515.1
Hypothetical protein.
  
     0.769
AHF63645.1
Hypothetical protein.
  
     0.765
AHF64054.1
Transcriptional regulator AbrB.
  
     0.763
AHF64739.1
Hypothetical protein.
  
     0.763
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.