STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64665.1Hypothetical protein. (427 aa)    
Predicted Functional Partners:
lpxA
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
  
 0.888
AHF62825.1
Hypothetical protein.
 
     0.775
AHF64772.1
Hypothetical protein.
 
     0.774
AHF64440.1
Hypothetical protein.
  
     0.743
AHF62678.1
Hypothetical protein.
 
     0.734
AHF63431.1
Putative porin; Belongs to the OprB family.
  
     0.698
AHF63187.1
Hypothetical protein.
  
     0.688
msrB
Methionine sulfoxide reductase B; Belongs to the MsrB Met sulfoxide reductase family.
       0.686
som
Putative porin; Belongs to the OprB family.
  
     0.686
AHF62677.1
Hypothetical protein.
 
     0.685
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.