Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64667.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
AHF64323.1
Hypothetical protein.
  
    0.773
psbO
Photosystem II manganese-stabilizing polypeptide.
  
     0.772
AHF63588.1
Hypothetical protein.
  
     0.772
AHF63617.1
Hypothetical protein.
  
     0.770
AHF63886.1
Hypothetical protein.
  
     0.767
AHF62609.1
Photosystem II stability/assembly factor-like protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.766
thf1
Thf1-like protein; May be involved in photosynthetic membrane biogenesis.
  
    0.764
AHF64742.1
Thioredoxin domain 2.
  
     0.762
AHF63618.1
Hypothetical protein.
  
     0.761
crtD
Carotene 7,8-desaturase.
  
     0.761
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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