Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHF62653.1 | AHF63696.1 | Syncc8109_0241 | Syncc8109_1332 | Hypothetical protein. | Hypothetical protein. | 0.768 |
| AHF62653.1 | ftrC | Syncc8109_0241 | Syncc8109_2367 | Hypothetical protein. | Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.768 |
| AHF62653.1 | ftrV | Syncc8109_0241 | Syncc8109_2244 | Hypothetical protein. | Putative ferredoxin-thioredoxin reductase, variable chain. | 0.754 |
| AHF62653.1 | psaE | Syncc8109_0241 | Syncc8109_0540 | Hypothetical protein. | Photosystem I subunit IV (PsaE); Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family. | 0.600 |
| AHF62653.1 | psaF | Syncc8109_0241 | Syncc8109_0693 | Hypothetical protein. | Photosystem I reaction center subunit III (PsaF). | 0.735 |
| AHF62653.1 | psb28 | Syncc8109_0241 | Syncc8109_1483 | Hypothetical protein. | Putative photosystem II reaction center Psb28 protein; Belongs to the Psb28 family. | 0.761 |
| AHF62653.1 | psbO | Syncc8109_0241 | Syncc8109_0304 | Hypothetical protein. | Photosystem II manganese-stabilizing polypeptide. | 0.772 |
| AHF63696.1 | AHF62653.1 | Syncc8109_1332 | Syncc8109_0241 | Hypothetical protein. | Hypothetical protein. | 0.768 |
| AHF63696.1 | ftrC | Syncc8109_1332 | Syncc8109_2367 | Hypothetical protein. | Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.769 |
| AHF63696.1 | ftrV | Syncc8109_1332 | Syncc8109_2244 | Hypothetical protein. | Putative ferredoxin-thioredoxin reductase, variable chain. | 0.765 |
| AHF63696.1 | psaF | Syncc8109_1332 | Syncc8109_0693 | Hypothetical protein. | Photosystem I reaction center subunit III (PsaF). | 0.628 |
| AHF63696.1 | psb28 | Syncc8109_1332 | Syncc8109_1483 | Hypothetical protein. | Putative photosystem II reaction center Psb28 protein; Belongs to the Psb28 family. | 0.671 |
| AHF63696.1 | psbO | Syncc8109_1332 | Syncc8109_0304 | Hypothetical protein. | Photosystem II manganese-stabilizing polypeptide. | 0.699 |
| ftrC | AHF62653.1 | Syncc8109_2367 | Syncc8109_0241 | Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Hypothetical protein. | 0.768 |
| ftrC | AHF63696.1 | Syncc8109_2367 | Syncc8109_1332 | Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Hypothetical protein. | 0.769 |
| ftrC | ftrV | Syncc8109_2367 | Syncc8109_2244 | Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Putative ferredoxin-thioredoxin reductase, variable chain. | 0.986 |
| ftrC | petF-2 | Syncc8109_2367 | Syncc8109_2229 | Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Ferredoxin. | 0.757 |
| ftrC | petF3 | Syncc8109_2367 | Syncc8109_0795 | Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Ferredoxin (2Fe-2S). | 0.757 |
| ftrC | psaE | Syncc8109_2367 | Syncc8109_0540 | Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Photosystem I subunit IV (PsaE); Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family. | 0.752 |
| ftrC | psaF | Syncc8109_2367 | Syncc8109_0693 | Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Photosystem I reaction center subunit III (PsaF). | 0.764 |
page 1 of 4