STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64687.1Putative transcriptional regulator. (214 aa)    
Predicted Functional Partners:
AHF64688.1
Hypothetical protein.
       0.773
sufB
FeS assembly protein SufB.
  
  
 0.671
ftrC
Ferredoxin thioredoxin reductase, catalytic beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
 
   
 0.671
AHF64683.1
ABC transporter, membrane component.
  
  
 0.615
sufC
FeS assembly ATPase SufC.
  
  
 0.595
cpcS-3
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
       0.555
AHF64682.1
Cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
       0.532
AHF63742.1
Putative transcriptional regulator, Crp/Fnr family.
  
    0.525
AHF64947.1
Putative ferric uptake regulator, FUR family; Belongs to the Fur family.
  
    0.476
tpx
Thioredoxin peroxidase.
  
    0.414
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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