Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
bcpPutative bacterioferritin comigratory (BCP) protein. (153 aa)    
Predicted Functional Partners:
AHF64704.1
Hypothetical protein.
       0.545
AHF64705.1
Hypothetical protein.
       0.545
AHF64420.1
Thioredoxin reductase.
  
 
 0.505
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
   0.467
trxA_1
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.456
fpaA
Flavoprotein.
     
 0.449
trxA
Thioredoxin; Belongs to the thioredoxin family.
    
 
 0.423
AHF64703.1
Putative protein phosphatase 2C.
       0.409
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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