STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64739.1Hypothetical protein. (236 aa)    
Predicted Functional Partners:
AHF62816.1
Hypothetical protein.
  
     0.770
AHF64285.1
Hypothetical protein.
  
     0.770
rpoZ
Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.765
abrB
Transcriptional regulator AbrB.
  
     0.764
AHF63187.1
Hypothetical protein.
  
     0.764
atp1
Putative ATP synthase protein 1.
  
     0.763
AHF63336.1
Hypothetical protein.
  
     0.759
AHF63010.1
Hypothetical protein.
  
     0.750
AHF63829.1
Hypothetical protein.
  
     0.742
AHF64200.1
Hypothetical protein.
  
     0.736
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.