Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64754.1Hypothetical protein. (225 aa)    
Predicted Functional Partners:
AHF64285.1
Hypothetical protein.
  
     0.745
AHF64739.1
Hypothetical protein.
  
     0.731
AHF62676.1
Hypothetical protein.
  
     0.720
AHF64948.1
Hypothetical protein.
  
     0.714
AHF62591.1
Hypothetical protein.
  
     0.713
AHF63829.1
Hypothetical protein.
  
     0.697
AHF64565.1
Hypothetical protein.
  
     0.695
AHF63927.1
Hypothetical protein.
  
     0.690
AHF64753.1
Hypothetical protein.
       0.644
AHF64757.1
ATPases involved in chromosome partitioning-like protein.
  
     0.590
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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