Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64769.1HesB/YadR/YfhF; Belongs to the HesB/IscA family. (130 aa)    
Predicted Functional Partners:
AHF63340.1
Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.750
nifS-2
NifS-like aminotransferase class-V.
 
 
 0.737
nifS
Putative cysteine desulfurase (class-V aminotransferase family).
 
 
 0.718
AHF62638.1
Hypothetical protein.
  
 0.698
AHF64770.1
Hypothetical protein.
       0.680
AHF62818.1
MRP protein-like protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
 
 0.662
AHF64767.1
Hypothetical protein.
       0.629
crtQ
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
       0.629
nifU
NifU-like protein.
  
 0.615
AHF64772.1
Hypothetical protein.
       0.611
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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