Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64770.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
AHF64791.1
Hypothetical protein; Belongs to the UPF0367 family.
  
     0.763
AHF62676.1
Hypothetical protein.
  
     0.751
AHF64559.1
Hypothetical protein.
  
     0.751
AHF63260.1
Hypothetical protein.
  
     0.742
AHF63495.1
Hypothetical protein.
  
     0.742
AHF63248.1
Hypothetical protein.
  
     0.741
AHF63725.1
Hypothetical protein.
  
     0.731
AHF64565.1
Hypothetical protein.
  
     0.727
rpoZ
Putative DNA-directed RNA polymerase (omega chain); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.726
AHF64772.1
Hypothetical protein.
       0.720
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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