Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64776.1Hypothetical protein. (688 aa)    
Predicted Functional Partners:
AHF64783.1
Hypothetical protein.
 
     0.780
AHF64777.1
Heat shock protein DnaJ-like protein.
       0.777
cysK-2
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.774
AHF64012.1
Hypothetical protein.
  
     0.768
AHF62744.1
Hypothetical protein.
 
     0.755
AHF64805.1
Hypothetical protein.
 
     0.745
AHF62930.1
Hypothetical protein.
  
     0.743
AHF62515.1
Hypothetical protein.
 
   
 0.740
rpcF
Phycobilin lyase beta subunit.
  
     0.719
AHF62591.1
Hypothetical protein.
  
     0.711
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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