Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64783.1Hypothetical protein. (531 aa)    
Predicted Functional Partners:
AHF64784.1
Putative glycosyl transferase.
  
  
 0.810
AHF64776.1
Hypothetical protein.
 
     0.780
AHF64785.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.697
AHF63113.1
Hypothetical protein.
 
  
 0.684
AHF63598.1
Hypothetical protein.
  
     0.667
AHF62744.1
Hypothetical protein.
  
     0.650
AHF64012.1
Hypothetical protein.
  
     0.633
AHF62967.1
Hypothetical protein.
  
     0.616
rpcF
Phycobilin lyase beta subunit.
  
     0.615
AHF63083.1
Hypothetical protein.
  
     0.613
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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