STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF64797.1Heavy metal translocating P-type ATPase. (771 aa)    
Predicted Functional Partners:
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.801
holB
DNA polymerase III, delta prime subunit.
       0.800
ycf3
Photosystem I assembly protein Ycf3; Seems to be required for the assembly of the photosystem I complex; Belongs to the Ycf3 family.
       0.589
AHF65044.1
Putative chloride channel.
 
  
 0.558
arsR
Putative transcriptional regulator, ArsR family.
  
  
 0.516
AHF64420.1
Thioredoxin reductase.
  
  
 0.509
AHF63359.1
Putative Na+/H+ antiporter, CPA2 family.
  
  
 0.481
drrA
ATPase.
 
 
 0.410
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.