Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AHF62799.1 | AHF64930.1 | Syncc8109_0393 | Syncc8109_2623 | Prephenate dehydrogenase. | Hypothetical protein. | 0.813 |
| AHF62799.1 | aroC | Syncc8109_0393 | Syncc8109_0309 | Prephenate dehydrogenase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.800 |
| AHF62799.1 | aspC | Syncc8109_0393 | Syncc8109_1393 | Prephenate dehydrogenase. | Aminotransferases class-I. | 0.910 |
| AHF62799.1 | hisC | Syncc8109_0393 | Syncc8109_2559 | Prephenate dehydrogenase. | Aminotransferases class-I. | 0.965 |
| AHF62799.1 | menF | Syncc8109_0393 | Syncc8109_2549 | Prephenate dehydrogenase. | Isochorismate synthase. | 0.828 |
| AHF62799.1 | tyrA | Syncc8109_0393 | Syncc8109_0640 | Prephenate dehydrogenase. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.630 |
| AHF64853.1 | menB | Syncc8109_2546 | Syncc8109_1565 | O-succinylbenzoate--CoA ligase. | Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA). | 0.983 |
| AHF64853.1 | menD | Syncc8109_2546 | Syncc8109_1566 | O-succinylbenzoate--CoA ligase. | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.821 |
| AHF64853.1 | menF | Syncc8109_2546 | Syncc8109_2549 | O-succinylbenzoate--CoA ligase. | Isochorismate synthase. | 0.836 |
| AHF64930.1 | AHF62799.1 | Syncc8109_2623 | Syncc8109_0393 | Hypothetical protein. | Prephenate dehydrogenase. | 0.813 |
| AHF64930.1 | aroC | Syncc8109_2623 | Syncc8109_0309 | Hypothetical protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.800 |
| AHF64930.1 | aspC | Syncc8109_2623 | Syncc8109_1393 | Hypothetical protein. | Aminotransferases class-I. | 0.800 |
| AHF64930.1 | hisC | Syncc8109_2623 | Syncc8109_2559 | Hypothetical protein. | Aminotransferases class-I. | 0.800 |
| AHF64930.1 | menF | Syncc8109_2623 | Syncc8109_2549 | Hypothetical protein. | Isochorismate synthase. | 0.908 |
| AHF64930.1 | trpE | Syncc8109_2623 | Syncc8109_0411 | Hypothetical protein. | Anthranilate synthase. | 0.813 |
| AHF64930.1 | tyrA | Syncc8109_2623 | Syncc8109_0640 | Hypothetical protein. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.800 |
| aroC | AHF62799.1 | Syncc8109_0309 | Syncc8109_0393 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Prephenate dehydrogenase. | 0.800 |
| aroC | AHF64930.1 | Syncc8109_0309 | Syncc8109_2623 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Hypothetical protein. | 0.800 |
| aroC | hisC | Syncc8109_0309 | Syncc8109_2559 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Aminotransferases class-I. | 0.672 |
| aroC | menF | Syncc8109_0309 | Syncc8109_2549 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Isochorismate synthase. | 0.858 |
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