Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64864.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
dgkA
Putative diacylglycerol kinase.
 
     0.733
pabA
Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase.
     
 0.715
AHF64860.1
Hypothetical protein.
 
     0.690
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
 
     0.653
ybeY
Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.590
AHF63336.1
Hypothetical protein.
  
     0.546
rfaG
Putative glycosyltransferase.
  
     0.541
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
 
     0.537
atp1
Putative ATP synthase protein 1.
  
     0.529
AHF63110.1
Hypothetical protein.
  
     0.527
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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