STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHF64872.1ATPase. (546 aa)    
Predicted Functional Partners:
AHF64256.1
Putative ABC transporter, oligopeptide.
 0.999
AHF64395.1
ABC transporter, substrate binding protein.
 
 0.998
dppB
Putative ABC transporter, oligopeptide.
 
 0.998
AHF64457.1
Putative cobalt transport protein.
  
 0.982
drrB
Putative multidrug efflux ABC transporter.
  
 
 0.848
AHF63805.1
Putative permease.
     
 0.833
drrA
ATPase.
    
 0.827
futC
ATPase; Belongs to the ABC transporter superfamily.
   
 
  0.819
hisM
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine.
     
 0.819
AHF63757.1
Phosphonate-binding periplasmic protein.
     
 0.819
Your Current Organism:
Synechococcus sp. WH 8109
NCBI taxonomy Id: 166314
Other names: S. sp. WH 8109, Synechococcus sp. WH8109
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.